Gene expression atlas of the Colorado potato beetle (Leptinotarsa decemlineata)

Wilhelm;Wang, Yangzi

Description

These data comprise 61 samples of short-read RNA-seq and one sample of long-read isoseq from the Colorado Potato Beetle (CPB). The RNA-seq samples represent tissues of :
* female adults: 6 tissues,
* male adults: 7 tissues,
* L4 larvae: 5 tissues,
* whole body of: L1, L2 and L3 larvae,
* eggs.
Those data were used to build a gene expression atlas of the CPB and a new genome annotation. The gene set annotation, the transcriptome and the functional annotation can be downloaded from this folder.The results of additional analysis are also available:
* WGCNA,
* tissue-specificity of the genes,
* GO enrichment.

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Mentions (0)

Metrics

Dataset Index

0.9

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

License

Creative Commons Attribution 4.0 International

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

50%

Source

Scholar Data Model

Keywords

Gene Expression (incl. Microarray and other genome-wide approaches)BioinformaticsFOS: Computer and information sciencesZoologyFOS: Biological sciences

Normalization Factors

FT

53.85

CTw

1.00

MTw

1.00