Sequence File 2: FASTA of Aligned NACHT Domain Only
Description
Sequence File 2: FASTA sequence alignment file. Sequences for NOD2 were collected on Ensembl and trimmed to just the NACHT domain using HMMER and aligned in AliView. Contains aligned protein coding sequences for the NACHT domain within the NOD2 sequence for 15 fish species: Blue Tilapia (Oreochromis aureus), Bluefin Tuna (Thunnus thynnus), Atlantic Mackerel (Scomber scombrus), Ballan Wrasse (Labrus bergylta), Clownfish (Amphiprion ocellaris), Zebrafish (Danio rerio), Brown Trout (Salmo trutta), Channel Catfish (Ictalurus punctatus), Goldfish (Carassius auratus), Japanese Medaka (Oryzias latipes), Atlantic Salmon (Salmo salar), Chinook Salmon (Oncorhynchus tshawytscha), Coho Salmon (Oncorhynchus kisutch), Atlantic Herring (Clupea harengus), and Barramundi/Asian Seabass (Lates calcarifer).
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Publication Details
DOI
Publisher
figshare
Subfield
Ophthalmology
Field
Medicine
Domain
Health Sciences
Confidence Score
30%
Source
Scholar Data Model