Additional file 5: of De novo transcriptome assembly of the grapevine phylloxera allows identification of genes differentially expressed between leaf- and root-feeding forms

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Rispe, Claude;Legeai, Fabrice;Papura, Daciana;Bretaudeau, Anthony;Hudaverdian, Sylvie;GaÍl Le Trionnaire;Tagu, Denis;JaquiÊry, Julie;FrançOis Delmotte

Description

Expression statistics and annotation information for each contig. Contig name, size (in bp), raw number of reads for each library (GA1, GA2, RA1, RA2), GO annotation (first line of the BLAST2GO output), blastx on nr (accession of the first hit, percent of identity, description), OMCL clustering in the pairwise comparison with the pea aphid genome (number of genes in the gene family, number of species, number of pea aphid genes and number of phylloxera genes). (ODS 4225 kb)

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.9

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Figshare

License

CC BY + CC0

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

53%

Source

Scholar Data Model

Keywords

GeneticsFOS: Biological sciencesMolecular Biology59999 Environmental Sciences not elsewhere classifiedFOS: Earth and related environmental sciencesEcology69999 Biological Sciences not elsewhere classifiedDevelopmental Biology110309 Infectious DiseasesFOS: Health sciencesPlant Biology60506 Virology

Normalization Factors

FT

53.85

CTw

1.00

MTw

1.00