Non-traditional <i>mcr</i>-containing archaea dominate the methane metabolism in geothermal springs: insights from genomics and evolution

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Chen, Xiaoxi;Hua, Zheng-Shuang

Description

This dataset contains supplementary data for the analyses presented in:Xiao-Xi Chen, Yan-Ni Qu, Yang-Zhi Rao, Ze-Wei Li, Qi-Jun Xie, Yuan-Qi Zhang, Paul N. Evans, Wen-Jun Li, Yu-Xian Li*, Zheng-Shuang Hua*. Non-traditional mcr-containing archaea dominate the methane metabolism in geothermal springs: insights from genomics and evolution (under review)Dataset contents:1_29_RMAGs_53markers.treefile: Phylogenomic tree of 29 reconstructed mcr-containing archaeal MAGs based on 53 concatenated archaeal marker genes, in Newick format. 2_cdhABCDE.treefile: Phylogenetic tree of concatenated cdhABCDE genes, in Newick format. 3_mtrABCDEFGH.treefile: Phylogenetic tree of concatenated mtrABCDEFGH genes, in Newick format. 4_Bathyarchaeia.treefile: Phylogenetic tree showing relationships among Bathyarchaeia orders, in Newick format. 5_mcrABG.treefile: Phylogenetic tree of concatenated mcrABG genes, in Newick format. 6_mtaA.treefile: Phylogenetic tree of mtaA genes, in Newick format.

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Mentions (0)

Metrics

Dataset Index

0.5

FAIR Score

85%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

License

Creative Commons Attribution 4.0 International

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

37%

Source

Scholar Data Model

Keywords

Microbial ecology

Normalization Factors

FT

53.85

CTw

1.00

MTw

1.00