Data-Sets_A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partner

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Sakalauskaite, Gabriele;Weingartner, Michael;Ebert, Sophie;Boot, Gina;Bock, Thomas;Birk, Julia;Tsachaki, Maria;Gallon, John;Piscuoglio, Salvatore;Odermatt, Alex

Description

Data of Figure 1, Additional Table 1: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure or table in PNG-format (1310030-214978_CBIO-D-24-00450_GS-BioID_Fig1.PNG, 310030-214978_CBIO-D-24-00450_GS_BioID_TabA1.png). Corresponding raw data from immunofluorescence measurements (Panel A and C) provided as 11 raw files (310030-214978_CBIO-D-24-00450_GS_BioID_13_2a-h.png) in PNG format. Corresponding raw data from western blot provided as two raw files in tif format (310030-214978_CBIO-D-24-00450_GS_BioID_2-1a-b.tif). All further experiment related information, protocols and subsequent data analysis provided as three metadata-files in TXT format (310030-214978_CBIO-D-24-00450_GS-BioID_13_1-2_M1.txt and 310030-214978_CBIO-D-24-00450_GS-BioID_2_1_M1 .txt, 310030-214978_CBIO-D-24-00450_GS_BioID_3_M1.txt) and three metadata files in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2-3.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_3_M2.pdf). Data of Figure 2: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure in PNG-format (310030-214978_CBIO-D-24-00450_GS_BioID_Fig2.png).  Corresponding raw data from western blot (Panel C) is provided as three files in TIF format (310030-214978_CBIO-D-24-00450_GS_BioID_2_2a-c.tif. All further experiment-related information and protocols are provided as two metadata files in TXT format (310030-214978_CBIO-D-24-00450_GS_BioID_2_2_M1.txt, 310030-214978_CBIO-D-24-00450_GS_BioID_5_1_M1.txt), two files in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_2_M3.pdf) and one file in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_TableA2.PNG). Data of Figure 3, Table 1, Additional Table 3 and Additional Table 4: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure or table in PNG-format (310030-214978_CBIO-D-24-00450_GS_BioID_Fig3.png, 310030-214978_CBIO-D-24-00450_GS_BioID_Table1.png and 310030-214978_CBIO-D-24-00450_GS_BioID_TableA4.png). Corresponding analysis of data obtained from proteomics (LC-MS/MS analysis) provided as three files in CSV format (310030-214978_CBIO-D-24-00450_GS_BioID_5_2_1-3.csv). All further experiment related information, protocols and subsequent data analysis are provided as metadata files (310030-214978_CBIO-D-24-00450_GS_BioID_5_2_M1) in TXT format. Data of Figure 4: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure in PNG-format (310030-214978_CBIO-D-24-00450_GS_BioID_Fig4.png). Corresponding data as four files in CSV format (310030-214978_CBIO-D-24-00450_GS_BioID_23_1a-b.csv and 310030-214978_CBIO-D-24-00450_GS_BioID_23_2a-b.csv). All further experiment-related information and data analysis are provided as a metadata file in TXT format (310030-214978_CBIO-D-24-00450_GS_BioID_23_M1.txt).Data of Figure 5: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure in PNG-format (310030-214978_CBIO-D-24-00450_GS-BioID_Fig5.PNG). Corresponding raw data from western blots provided as seven files in Tif format (310030-214978_CBIO-D-24-00450_GS_BioID_2-3a-3g.tif). All further experiment-related information, protocols and data analysis provided as one metadata file in TXT format (310030-214978_CBIO-D-24-00450_GS-BioID_2_3_M1 .txt), two in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_2_M3.pdf) and one in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_TableA2.PNG).Data of Figure 6, Additional Figure 5, Additionaly Figure 7, Additional Table 2: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figures and tables in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_Fig6.PNG, 310030-214978_CBIO-D-24-00450_GS-BioID_FigA5.PNG, 310030-214978_CBIO-D-24-00450_GS-BioID_FigA7.PNG, 310030-214978_CBIO-D-24-00450_GS-BioID_TableA2.PNG). Corresponding raw data obtained from western blots provided in tif format (310030-214978_CBIO-D-24-00450_GS_BioID_2-4.tif). Raw data obtained from UV-Vis spectroscopy provided as two files in CSV format (310030-214978_CBIO-D-24-00450_GS-BioID_17-1.csv, 310030-214978_CBIO-D-24-00450_GS-BioID_17-2.csv). All further experiment-related information, protocols and data analyses provided as two metadata files in TXT format (310030-214978_CBIO-D-24-00450_GS-BioID_2_4_M1 .txt, 310030-214978_CBIO-D-24-00450_GS-BioID_17_1-2_M1.txt) and two files in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_2_M3.pdf).Data of Additional Figure 1: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_FigA1.PNG). Corresponding raw data files obtained from western blot are provided as three files in tif format (310030-214978_CBIO-D-24-00450_GS-BioID_2_5-1-3.tif). All further experiment-related information and protocols are provided as one metadata file in TXT format (310030-214978_CBIO-D-24-00450_GS-BioID_2_5_M1.txt) and two files in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_2_M3.pdf).Data of Additional Figure 2, Additional Figure 3: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figures in PNG format (310030-214978_CBIO-D-24-00450_GS_BioID_FigA2.png, 310030-214978_CBIO-D-24-00450_GS_BioID_FigA3.png). Corresponding data is provided as 14 files in PDF format (310030-214978_CBIO-D-24-00450_GS_BioID_26_1-14.pdf). All further experiment-related information is provided as one metadata file in TXT format (310030-214978_CBIO-D-24-00450_GS_BioID_26_M1.txt).Data of Additional Figure 4: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_FigA4 .PNG). Information about raw data is provided as one file in TXT format (ReadMe.txt). All further experiment-related information and protocols are provided as one metadata file in TXT format (310030-214978_CBIO-D-24-00450_GS-BioID_2_6_M1 .txt), two files in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_2_M3.pdf) and one file in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_TableA2.PNG).Data of Additional Figure 6: A BioID-based approach uncovers the interactome of hexose-6-phosphate dehydrogenase in breast cancer cells and identifies anterior gradient protein 2 as an interacting partnerDataset (CBIO-D-24-00450) contains the original figure in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_FigA6 .PNG). Raw data from western blot provided as four files in tif format (310030-214978_CBIO-D-24-00450_GS-BioID_2_7-1-4.tif). All further experiment-related information, protocols and data analyses are provided as one metadata file in TXT format (310030-214978_CBIO-D-24-00450_GS-BioID_2_7_M1 .txt), two files in PDF format (310030-214978_CBIO-D-24-00450_GS-BioID_2_M2.pdf, 310030-214978_CBIO-D-24-00450_GS-BioID_2_M3.pdf) and one file in PNG format (310030-214978_CBIO-D-24-00450_GS-BioID_TableA2.PNG).

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.5

FAIR Score

79%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Zenodo

License

Creative Commons Attribution 4.0 International

Assigned Domain

Subfield

Rheumatology

Field

Medicine

Domain

Health Sciences

Confidence Score

36%

Source

Scholar Data Model

Keywords

Anterior gradient protein 2hexose-6-phosphate dehydrogenaseendoplasmic reticulumprotein-protein interactionproximity biotinylationbreast cancer

Normalization Factors

FT

51.92

CTw

1.00

MTw

1.00