Data for: Cunha Neto et al. "Rampant convergent evolution of vascular oddities and a synnovation characterize the rapid radiation of Paullinieae lianas".

Supplemental TablesTable S1. Accession database. Plant specimens used in the Paullinieae phylogeny, including their taxonomic classifications, collection details, and herbarium information. Table S3. Sequencing and assembly statistics. Table S4. Anatomical database. Detailed anatomical data for species in the Paullinieae tribe and outgroups, focusing on stem development and vascular variants. The species list included in this database also comprises the curated list of species in Paullinieae by Dr. Pedro Acevedo-Rodríguez, as well as the total number of species accepted in this study. Tree Inference data filesastral.treThis is the species tree infered through ASTRAL with 351 exon gene trees. iqtree.treThis is the maximum likelihood tree with bootstrap support at the nodes with the tips assigned their species names (e.g., Paullinia_atrolineata_b)pau_333s_351g_partitions.contreeThis is the maximum likelihood tree with bootstrap support at the nodes with the sample ID numbers (PAU24)pau_333s_351g.fastaThis is the concatenated alignment of 351 genes across 333 samples. The sample ID names are still present.pau_333s_351g_partitionsThis is the partition gene file, showing the coordinates of each of 351 genes across the concatenated alignment.ChangeSampleNames_iqtree.shThis script uses the function “sed” to find and replace sample ID (e.g., PAU24) in pau_333s_351g_partitions.contree species names (e.g., “Serjania_atrolineata_b”) in a file called iqtree.tre CI-combined_chronograms.treThis is the chronogram infered by treePL, by time calibrating 100 trees with a constrained topology but varying branch lengths.