Non-traditional <i>mcr</i>-containing archaea dominate the methane metabolism in geothermal springs: insights from genomics and evolution

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Chen, Xiaoxi;Hua, Zheng-Shuang

Description

This dataset contains supplementary data for the analyses presented in:Xiao-Xi Chen, Yan-Ni Qu, Yang-Zhi Rao, Ze-Wei Li, Qi-Jun Xie, Yuan-Qi Zhang, Paul N. Evans, Wen-Jun Li, Yu-Xian Li*, Zheng-Shuang Hua*. Non-traditional mcr-containing archaea dominate the methane metabolism in geothermal springs: insights from genomics and evolution (under review)Dataset contents:1_29_RMAGs_53markers.treefile: Phylogenomic tree of 29 reconstructed mcr-containing archaeal MAGs based on 53 concatenated archaeal marker genes, in Newick format.2_cdhABCDE.treefile: Phylogenetic tree of concatenated cdhABCDE genes, in Newick format.3_mtrABCDEFGH.treefile: Phylogenetic tree of concatenated mtrABCDEFGH genes, in Newick format.4_Bathyarchaeia.treefile: Phylogenetic tree showing relationships among Bathyarchaeia orders, in Newick format.5_mcrABG.treefile: Phylogenetic tree of concatenated mcrABG genes, in Newick format.6_mtaA.treefile: Phylogenetic tree of mtaA genes, in Newick format.SZTDM_202302_bins_159.fa: mcr-containing Bathyarchaeia MAG.SZTDM_202308_bins_85.fa: mcr-containing Bathyarchaeia MAG.SZTDM_202401_bins_71.fa: mcr-containing Bathyarchaeia MAG.

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Mentions (0)

Metrics

Dataset Index

0.1

FAIR Score

85%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

37%

Source

Scholar Data Model

Keywords

Microbial ecology

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00