Genomic data from the Chinese Rhesus macaque (<em>Macaca mulatta lasiota</em>).

Yan, Guangmei;Zhang, Guojie;Fang, Xiaodong;Zhang, Yanfeng;Li, Cai;Ling, Fei;Cooper, David, N;Li, Qiye;Li, Yan;van Gool, Alain, J;Du, Hongli;Chen, Jiesi;Chen, Ronghua;Zhang, Pei;Huang, Zhiyong;Thompson, John, R;Meng, Yuhuan;Bai, Yinqi;Wang, Jufang;Zhuo, Min;Wang, Tao;Huang, Ying;Wei, Liqiong;Li, Jianwen;Wang, Zhiwen;Hu, Haofu;Le, Liang;Stenson, Peter, D;Li, Bo;Liu, Xiaoming;Ball, Edward, V;An, Na;Huang, Quanfei;Zhang, Yong;Fan, Wei;Zhang, Xiuqing;Li, Yingrui;Wang, Wen;Katze, Michael, G;Su, Bing;Nielsen, Rasmus;Yang, Huanming;Wang, Jun;Wang, Xiaoning;Wang, Jian

Description

The Chinese rhesus macaque (Macaca mulatta lasiota) is a subspecies of rhesus macaques that mainly resides in western and central China. Due to their anatomical and physiological similarity with human beings, macaques are a common laboratory model. Also, as several macaques species have been sequenced, such as the Indian rhesus macaque and the crab-eating macaque, examination of the Chinese rhesus macaque (CR) genome offers interesting insights into the entire Macaca genus.The DNA sample for data sequencing and analyses was obtained from a five-year old female CR from southwestern China. The genome was sequenced on the IlluminaGAIIx platform, from which 142-Gb of high-quality sequence, representing 47-fold genome coverage for CR. The total size of the assembled CR genome was about 2.84 Gb, providing 47-fold on average. Scaffolds were assigned to the chromosomes according to the synteny displayed with the Indian rhesus macaque and human genome sequences. About 97% of the CR scaffolds could be placed onto chromosomes.

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Dataset Index

1.9

FAIR Score

31%

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5

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0

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Publication Details

DOI

Publisher

GigaScience

License

Creative Commons Zero v1.0 Universal

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

38%

Source

Scholar Data Model

Keywords

Genomic

Normalization Factors

FT

53.85

CTw

1.00

MTw

1.00