Nematostella vectensis transcriptome and gene models v2.0

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Fredman, David;Michaela Schwaiger;Fabian Rentzsch;Technau, Ulrich

Description

The gene models, transcripts and other derived data were generated from a comprehensive transcriptome survey of samples taken from five embryonic stages, adult female, and adult male samples. In total 1.6 billion 76-100 bp pair-end reads were obtained. The reads were mapped onto the N. vectensis genome v1.0, and new gene models were constructed using the RNA-seq evidence with the Augustus gene caller. These RNA-seq evidence based gene models are identified by a NVE prefix.

Citations (2)

Mentions (0)

Metrics

Dataset Index

0.8

FAIR Score

85%

Citations

2

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

80%

Source

Open Alex

Keywords

Computational Biology60102 BioinformaticsFOS: Computer and information sciencesMarine BiologyDevelopmental BiologyEvolutionary BiologyFOS: Biological sciences

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00