Nematostella vectensis transcriptome and gene models v2.0
View DatasetFredman, David;Michaela Schwaiger;Fabian Rentzsch;Technau, Ulrich
Description
The gene models, transcripts and other derived data were generated from a comprehensive transcriptome survey of samples taken from five embryonic stages, adult female, and adult male samples. In total 1.6 billion 76-100 bp pair-end reads were obtained. The reads were mapped onto the N. vectensis genome v1.0, and new gene models were constructed using the RNA-seq evidence with the Augustus gene caller. These RNA-seq evidence based gene models are identified by a NVE prefix.
Citations (2)
Cited on 04 November 2016
Weight: 1.00
Cited on 01 April 2015
Weight: 1.00
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Publication Details
Subfield
Molecular Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
80%
Source
Open Alex
Keywords
Computational Biology60102 BioinformaticsFOS: Computer and information sciencesMarine BiologyDevelopmental BiologyEvolutionary BiologyFOS: Biological sciences