Description
Apostasia shenzhenica has a karyotype of 2N=2X=68 with uniform small-size chromosomes . To completely sequence A. shenzhenica genome, we generated a total of 80.02 Gb of raw reads, with multiple insert libraries ranging in size from 180 bp to 20 Kb. A K-mer analysis estimated the genome size of A. shenzhenica at 471.0Mb. We assembled the sequence using Allpaths-lg (49292) software. The total length of the assembly was 348Mb (scaffold N50 1.196 Mb in length; corresponding contig N50 length 30.1 Kb).
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Publication Details
Subfield
Genetics
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
38%
Source
Scholar Data Model
Keywords
Genome sequencing and assemblyMonoisolate