Integrated genomic, climate and phenotypic dataset for genotype times environment interaction studies in winter wheat

This dataset contains processed genomic, climate, and phenotypic data from Exp_2 to Exp_5. All data files are saved in R's .qs format for efficient storage and loading. The corresponding code for using these files is available at https://github.com/AbhishekGogna/KIBREED_public1. Genotypic Datag_data_add* - Additive Genomic Effects MatrixFormat: Matrix of genotypes × markersContent: Additive genetic effects for genotypes based on marker dataRow names: Genotype identifiers (Geno_1, Geno_2, ...)Column names: Marker identifiers (mrkr_1, mrkr_2, ...)g_data_dom* - Dominance Genomic Effects MatrixFormat: Matrix of genotypes × markersContent: Dominance genetic effects for genotypes based on marker dataRow names: Genotype identifiers (Geno_1, Geno_2, ...)Column names: Marker identifiers (mrkr_1, mrkr_2, ...)2. Climate Dataev_data* - Environment Variables MatrixFormat: Matrix of environments × environmental variablesContent: Climate and environmental data for testing environmentsRow names: Environment identifiers (Env_1, Env_2, ...)Column names: Environmental variable identifiers (var_1, var_2, ...)3. Phenotypic Datapheno_acr* - Phenotype Data for Genotypes Averaged Across Testing EnvironmentsFormat: Data frame with observationsContent: Phenotype data for genotypes averaged across testing environments as derived after correcting for environment effectsColumns:Series: Experimental series identifierGeno_n: Genotype identifier (corresponds to genomic data row names)BLUEs_acr: Grain yield values in quintals per hectare (Best Linear Unbiased Estimates)Type: Genotype category (Line or Hybrid)pheno_wtn* - Phenotype Data for Genotypes Within Testing EnvironmentsFormat: Data frame with observationsContent: Phenotype data for genotypes within testing environments as derived after correcting for experimental design effectsColumns:Env_n: Environment identifier (corresponds to climate data row names)Exp: Experiment identifierSite_n: Site identifierYear: Year of evaluationGeno_n: Genotype identifier (corresponds to genomic data row names)Type: Genotype category (Line or Hybrid)Series: Experimental series identifierBLUEs_wtn: Grain yield values in quintals per hectare (Best Linear Unbiased Estimates)NotesAll data is subset from the complete experimental datasetAll identifiers have been anonymized for data privacy while maintaining relational integritySoftware requirements and detailed usage examples are documented in the GitHub repository FundingGerman Federal Ministry of Food and Agriculture funded project KIBREED (FKZ: 28DK131A20A)