Published on 25 February 2019

GTEx gene-level expression summary for Snaptron

View Dataset
Langmead, Benjamin;Wilks, Christopher

Description

GTEx gene-level expression summary from the Snaptron collection. Format is a tab-separated text file compressed and indexed using BGZip, along with supplementary files containing a Tabix index for the data (ending in tbi) as well as two files describing the samples represented in the columns of the data file (ending in tsv). Uses GENCODE v25 annotation for quantification. Source data for the quantification are the bigWig files produced as part of recount2. More information at http://snaptron.cs.jhu.edu.

Citations (2)

Mentions (0)

Metrics

Dataset Index

1.6

FAIR Score

85%

Citations

2

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Zenodo

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

39%

Source

Scholar Data Model

Keywords

gtex, exon, summary, rna-seq

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00