Published on 01 January 2019

Additional file 12 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

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HĂŠlĂŠna Gaspar;Gerome Breen

Description

5-fold cross-validated recall for twenty 1000 Genomes Project populations (19 classes) using SVM, PCA or GTM. Recall of optimized models for the following algorithms: SVM 10 PCs = support vector machine classification model using 10 principal components, PCA 8-NN = k-nearest neighbours model based on 2D PCA map (k = 8), GTM 3 or 10 PCs = bayesian classification model based on generative topographic mapping using 3 or 10 principal components. File name: recall_crossvalidation_19classes.html. (HTML 8 kb)

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.7

FAIR Score

15%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Genetics

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

78%

Source

Open Alex

Keywords

GeneticsFOS: Biological sciencesEcology69999 Biological Sciences not elsewhere classified80699 Information Systems not elsewhere classifiedFOS: Computer and information sciences19999 Mathematical Sciences not elsewhere classifiedFOS: MathematicsMarine BiologyCancerPlant BiologyComputational Biology

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00