Published on 12 April 2019

Raw data for MSI prediction from HE

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Kather, Jakob Nikolas

Description

Network_comparison.xlsx contains raw data for the comparison of different neural network models on the tumor detection benchmark task. This is related to Extended Data Figure 1 in our manuscript "Deep learning can predict microsatellite instability directly from histology in gastrointestinal cancer"TCGA_GI_Test_set_predictions.xlsx contains predicted MSIness for test set patients in TCGA-CRC-KR, TCGA-CRC-DX, TCGA-STAD. This is related to Extended Data Figure 2 in our manuscript "Deep learning can predict microsatellite instability directly from histology in gastrointestinal cancer"DACHS_predictions.xlsx contains predicted MSIness for DACHS patients. This is related to Extended Data Figure 2 in our manuscript "Deep learning can predict microsatellite instability directly from histology in gastrointestinal cancer"DACHS_MSIness_in_geneticMSS.xlsx contains MSIness raw data for genetic MSS DACHS patients. This is related to Extended Data Figure 2 in our manuscript "Deep learning can predict microsatellite instability directly from histology in gastrointestinal cancer"in all files, each line is one patient.

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.3

FAIR Score

13%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Zenodo

Assigned Domain

Subfield

Oncology

Field

Medicine

Domain

Health Sciences

Confidence Score

39%

Source

Scholar Data Model

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00