Description
See https://github.com/stelzch/reproducible-reduce-benchmark for details and usage.data.tar.lzmaThe dataset compilation in data.tar.lzma is adapted from the RAxML-NG paper, previously published under https://figshare.com/s/6123932e0a43280095efPlease cite the original studies listed in Table 3 of the RAxML-NG paper supplement when (re-)using the datasets.Changes made to the data:The num_pe file contains the recommended number of MPI ranks as given by raxml-ng --parseThe time.s file contains a runtime estimate in minutes.Rearranged file hierarchyresults.tar.lzmaContains the log files from our reproducible RAxML-NG executions.benchmark-supermuc.tar.gzBinaries, log files and intermediate files from Repro-RAxML-NG executions on the SuperMUC-NG. Additionally, results from isolated benchmarks of our reduce algorithm ReproRed.evaluation.tar.lzmaInput data, RAxML-NG log files and results of non-reproducible tree searches on TreeBASE datasets with varying thread count and varying random seed.evaluation-revision.tar.lzmaAdditional files produced during revision. Quartet-distances of ML trees.
Citations (1)
Cited on 29 January 2026
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