Transgenic Mouse Enhancer Assay - Vista Enhancer ID: mm402

See link to the data preparation protocols for this study in the Additional Information section . See links to Genome Browser in the Additional Information section. Enhancer location: Mouse genome mm9, chr6:50771120-50773588 Name: mCF88 Vista Enhancer ID: mm402 Nearest craniofacial gene or locus: none Enhancer expression: positive Tissues where active: branchial arch, forebrain, hindbrain, midbrain, neural tube, other This data set includes the following: * 4 files in .tgz format. Each of these corresponds to one .avi file and unzips to a set of .png files, each of which represents the individual frames of the movie (and, in case of the transverse/sagittal/coronal movies, can be used to retrieve individual virtual sections through features of interest in .png image format). [.tgz files can be unzipped with WinZip or Stuffit on a PC or Mac. On linux, treat the file as a gzipped .tar file: gunzip < file.tgz | tar xvf - ] * A .pdf file that summarizes the whole-mount data for the tested element. This file includes light microscopy whole-mount images of the LacZ reporter gene expression in mouse embryos, a summary of the annotation of the expression pattern, the DNA sequence of the tested element in Fasta format, and the sequences of the primers used to generate the test construct. Follow corresponding link in the Additional Information section to see this information in the Vista Enhancer Browser at Lawrence Berkeley Laboratory * Tested element.txt: Download the text file mCF88metadata.txt from the External Reference section