Description
Data files and pretrained model weights for D3: DNA Discrete Diffusion, a discrete diffusion framework for conditional generation of DNA regulatory sequences.Code: https://github.com/anirbansarkar-cs/D3-DNA-Discrete-DiffusionPackage: d3-dna (pip install d3-dna)This deposit contains LentiMPRA datasets (K562, HepG2, WTC11), LegNet oracle checkpoints for evaluation, a DeepSTARR oracle, and the D3-Transformer diffusion model trained on K562. Additional datasets and model weights will be added in future versions.
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Metrics Over Time
Publication Details
Subfield
Molecular Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
55%
Source
Scholar Data Model
Keywords
DNAdiscrete diffusiongenerative modelsMPRAregulatory sequencesdeep learning