Published on 23 October 2020

Microbiome dataset used in SIMON analysis for early-stage detection of cancer

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Tomic, Adriana

Description

The Zeller dataset contains information on the microbiome species abundance in healthy individuals and colorectal cancer patients (doi: 10.15252/msb.20145645) and was used for the SIMON analysis as described (https://doi.org/10.1101/2020.08.16.252767). The data was access through MetagenomicData package as described by Pasolli and colleagues (doi: 10.1038/nmeth.4468). In total 184 individuals were included of which 93 were healthy controls and 91 colorectal cancer patients.

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.9

FAIR Score

81%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Zenodo

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

79%

Source

Open Alex

Keywords

cancer, metabiome, predictive modeling, data mining, machine learning

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00