Published on 23 October 2020
Microbiome dataset used in SIMON analysis for early-stage detection of cancer
View DatasetTomic, Adriana
Description
The Zeller dataset contains information on the microbiome species abundance in healthy individuals and colorectal cancer patients (doi: 10.15252/msb.20145645) and was used for the SIMON analysis as described (https://doi.org/10.1101/2020.08.16.252767). The data was access through MetagenomicData package as described by Pasolli and colleagues (doi: 10.1038/nmeth.4468). In total 184 individuals were included of which 93 were healthy controls and 91 colorectal cancer patients.
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Publication Details
Subfield
Molecular Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
79%
Source
Open Alex
Keywords
cancer, metabiome, predictive modeling, data mining, machine learning