Additional file 4 of Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data

Additional file 4: Table S3. Result comparison of NRY haplogroup classification tools on VCF data. This table gives a comparison of NRY haplogroup results of 1, 233 male samples from the 1000 Genomes Project data set phase 3 in VCF, performed by different NRY haplogroup classification tools that can use VCF data as input files, including Y-LineageTracker, HaploGrouper, and AMY-Tree.