Automated Author ProfileP. Vogler, Alfried
P. Vogler, Alfried
Current S-Index
Sum of Dataset Indices for all datasets
Average Dataset Index per Dataset
Average Dataset Index per dataset
Total Datasets
Total datasets for this author
Average FAIR Score
Average FAIR Score per dataset
Total Citations
Total citations to the author's datasets
Total Mentions
Total mentions of the author's datasets
S-Index Interpretation
The S-Index (Sharing Index) is a comprehensive metric that represents the cumulative impact of all your datasets. It is calculated as the sum of Dataset Index scores across all your claimed datasets.
What it means:
- A higher S-index indicates greater overall impact of your datasets relative to typical datasets in their fields of research
- The S-Index grows as you add more datasets or as existing datasets gain more citations and mentions
- It provides a single number to track your research data impact over time
Current S-Index: 3.0 (sum of 8 datasets Dataset Index scores)
More information here.
S-Index Over Time
Cumulative Citations Over Time
Cumulative Mentions Over Time
Datasets
This dataset contains 2,366 newly assembled beetle mitochondrial genomes from Panama and Borneo, generated using pooled-DNA genome skimming and multiple assembly pipelines. These sequences were combined with > 3,000 re-annotated GenBank mitogenomes, producing a phylogenetic dataset comprising 5,518 beetles and 9 outgroups, representing nearly all major coleopteran lineages and 145 families.The package includes:GenBank flatfiles (mmg_5527.gb) for all assembled full or partial mitogenomesA maximum-likelihood phylogenetic tree (!!phy_6k_5527_NTBIN_RN_Aug25_noSci_pipe.tree) with 5,527 terminalsMetadata (Metadata.xlsx) including unique specimen IDs, morphospecies labels, locality information, and provisional taxonomy2,246 beetle images (images2246.zip) referenced via specimen codes and taxonomic assignmentsBackbone constraint tree (Constraint_CERNedit.tree) enforcing 9 outgroups and 80 basal Coleoptera nodes derived from consensus phylogenomic studiesThis dataset provides a standardized, large-scale mitogenomic resource for biodiversity research, phylogenetics, and comparative analyses of Coleoptera.
Authors
- Lee, Seunghyun ;
- Creedy, Thomas J. ;
- Yeo, Darren ;
- Liu, Huaxi ;
- Ounjai, Sarawut ;
- Carpenter, Fiona ;
- Zhou, Zichen ;
- Wu, Yilei ;
- Correia, Maria ;
- Flores, Eric ;
- Motyka, Michal ;
- Garner, Beulah ;
- Bocak, Ladislav ;
- P. Vogler, Alfried
This dataset contains 2,366 newly assembled beetle mitochondrial genomes from Panama and Borneo, generated using pooled-DNA genome skimming and multiple assembly pipelines. These sequences were combined with > 3,000 re-annotated GenBank mitogenomes, producing a phylogenetic dataset comprising 5,518 beetles and 9 outgroups, representing nearly all major coleopteran lineages and 145 families.The package includes:GenBank flatfiles (mmg_5527.gb) for all assembled full or partial mitogenomesA maximum-likelihood phylogenetic tree (!!phy_6k_5527_NTBIN_RN_Aug25_noSci_pipe.tree) with 5,527 terminalsMetadata (Metadata.xlsx) including unique specimen IDs, morphospecies labels, locality information, and provisional taxonomy2,246 beetle images (images2246.zip) referenced via specimen codes and taxonomic assignmentsBackbone constraint tree (Constraint_CERNedit.tree) enforcing 9 outgroups and 80 basal Coleoptera nodes derived from consensus phylogenomic studiesThis dataset provides a standardized, large-scale mitogenomic resource for biodiversity research, phylogenetics, and comparative analyses of Coleoptera.
Authors
- Lee, Seunghyun ;
- Creedy, Thomas J. ;
- Yeo, Darren ;
- Liu, Huaxi ;
- Ounjai, Sarawut ;
- Carpenter, Fiona ;
- Zhou, Zichen ;
- Wu, Yilei ;
- Correia, Maria ;
- Flores, Eric ;
- Motyka, Michal ;
- Garner, Beulah ;
- Bocak, Ladislav ;
- P. Vogler, Alfried
This dataset contains 2,366 newly assembled beetle mitochondrial genomes from Panama and Borneo, generated using pooled-DNA genome skimming and multiple assembly pipelines. These sequences were combined with > 3,000 re-annotated GenBank mitogenomes, producing a phylogenetic dataset comprising 5,518 beetles and 9 outgroups, representing nearly all major coleopteran lineages and 145 families.The package includes:GenBank flatfiles (.gb) for all assembled full or partial mitogenomesA maximum-likelihood phylogenetic tree (.tree) with 5,527 terminalsMetadata (.xlsx) including unique specimen IDs, morphospecies labels, locality information, and provisional taxonomy2,246 beetle images referenced via specimen codes and taxonomic assignmentsBackbone constraint tree (.tree) enforcing 9 outgroups and 80 basal Coleoptera nodes derived from consensus phylogenomic studiesThis dataset provides a standardized, large-scale mitogenomic resource for biodiversity research, phylogenetics, and comparative analyses of Coleoptera.
Authors
- Lee, Seunghyun ;
- Creedy, Thomas J. ;
- Yeo, Darren ;
- Liu, Huaxi ;
- Ounjai, Sarawut ;
- Carpenter, Fiona ;
- Zhou, Zichen ;
- Wu, Yilei ;
- Correia, Maria ;
- Flores, Eric ;
- Motyka, Michal ;
- Garner, Beulah ;
- Bocak, Ladislav ;
- P. Vogler, Alfried
Supplementary files for Scientific Data submission: A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia BeetlesFile description:OTUsotu_table.txt - OTU x Sample tableOTUstaxonomy.txt - OTU taxonomy tabledynamic.OTUs.krona.report.html - interactive Krona plot showing abundance of OTUsASV_frequency_table_UKSurvey.csv - ASV x Sample tableall_nonchimeras_UKSurvey.fa - Representative sequences for ASVsOTUssequences.fasta - Representative sequences for OTUsmetadata.csv - Sample metadatasite_metadata.csv - Site metadataassignments_reportOBS3YEFX.csv - TBAS and RDP assignmentsalpha_div_stats.csv - OTU richness and rarefied richness for each beetle sample
Authors
- Llewellyn, Theo ;
- P. Vogler, Alfried ;
- Ceballos Escalera, Angelina ;
- Inward, Daegan ;
- Richards, John
Supplementary files for Scientific Data submission: A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia BeetlesFile description:OTUsotu_table.txt - OTU x Sample tableOTUstaxonomy.txt - OTU taxonomy tabledynamic.OTUs.krona.report.html - interactive Krona plot showing abundance of OTUsASV_frequency_table_UKSurvey.csv - ASV x Sample tableall_nonchimeras_UKSurvey.fa - Representative sequences for ASVsOTUssequences.fasta - Representative sequences for OTUsmetadata.csv - Sample metadatasite_metadata.csv - Site metadataassignments_reportOBS3YEFX.csv - TBAS and RDP assignmentsalpha_div_stats.csv - OTU richness and rarefied richness for each beetle sample
Authors
- Llewellyn, Theo ;
- P. Vogler, Alfried ;
- Ceballos Escalera, Angelina ;
- Inward, Daegan ;
- Richards, John
This dataset contains 2,366 newly assembled beetle mitochondrial genomes from Panama and Borneo, generated using pooled-DNA genome skimming and multiple assembly pipelines. These sequences were combined with > 3,000 re-annotated GenBank mitogenomes, producing a phylogenetic dataset comprising 5,518 beetles and 9 outgroups, representing nearly all major coleopteran lineages and 145 families.The package includes:GenBank flatfiles (.gb) for all assembled full or partial mitogenomesA maximum-likelihood phylogenetic tree (.tree) with 5,527 terminalsMetadata (.xlsx) including unique specimen IDs, morphospecies labels, locality information, and provisional taxonomy2,246 beetle images referenced via specimen codes and taxonomic assignmentsThis dataset provides a standardized, large-scale mitogenomic resource for biodiversity research, phylogenetics, and comparative analyses of Coleoptera.
Authors
- Lee, Seunghyun ;
- Creedy, Thomas J. ;
- Yeo, Darren ;
- Liu, Huaxi ;
- Ounjai, Sarawut ;
- Carpenter, Fiona ;
- Zhou, Zichen ;
- Wu, Yilei ;
- Correia, Maria ;
- Flores, Eric ;
- Motyka, Michal ;
- Garner, Beulah ;
- Bocak, Ladislav ;
- P. Vogler, Alfried
Supplementary files for Scientific Data submission: A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia BeetlesFile description:OTUsotu_table.txt - OTU x Sample tableOTUstaxonomy.txt - OTU taxonomy tabledynamic.OTUs.krona.report.html - interactive Krona plot showing abundance of OTUsASV_frequency_table_UKSurvey.csv - ASV x Sample tableall_nonchimeras_UKSurvey.fa - Representative sequences for ASVsOTUssequences.fasta - Representative sequences for OTUsmetadata.csv - Sample metadatasite_metadata.csv - Site metadataassignments_reportUA4EAZEB.csv - TBAS and RDP assignmentsalpha_div_stats.csv - OTU richness and rarefied richness for each beetle sample
Authors
- Llewellyn, Theo ;
- P. Vogler, Alfried ;
- Ceballos Escalera, Angelina ;
- Inward, Daegan ;
- Richards, John
Supplementary files for Scientific Data submission: A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia BeetlesFile description:OTUsotu_table.txt - OTU x Sample tableOTUstaxonomy.txt - OTU taxonomy tabledynamic.OTUs.krona.report.html - interactive Krona plot showing abundance of OTUsASV_frequency_table_UKSurvey.csv - ASV x Sample tableall_nonchimeras_UKSurvey.fa - Representative sequences for ASVsOTUssequences.fasta - Representative sequences for OTUsmetadata.csv - Sample metadatasite_metadata.csv - Site metadataassignments_reportOBS3YEFX.csv - TBAS and RDP assignmentsalpha_div_stats.csv - OTU richness and rarefied richness for each beetle sample
Authors
- Llewellyn, Theo ;
- P. Vogler, Alfried ;
- Ceballos Escalera, Angelina ;
- Inward, Daegan ;
- Richards, John